Sunflower is an application that models the simultaneous binding of transcription factors to DNA. It uses a hidden Markov model that resembles a sunflower.
Installation
Sunflower has several prerequisites, but most of them are shared with the Genomedata package. You can use the interactive Genomedata install script to install Genomedata and its prerequisites, and set up your environment properly to use them. Just type these two commands on your UNIX system:
wget http://noble.gs.washington.edu/proj/genomedata/install.py
python install.py
After logging out and logging in again, you can easily install Sunflower with this command:
easy_install http://www.ebi.ac.uk/~hoffman/software/sunflower/
Product's homepage
Requirements:
· Python
· genomedata
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