Sunflower 1.1.0

Model transcription factor binding to DNA

  Add it to your Download Basket!

 Add it to your Watch List!

0/5

Rate it!
send us
an update
LICENSE TYPE:
Other/Proprietary License
USER RATING:
UNRATED
  0.0/5
DEVELOPED BY:
Michael Hoffman
HOMEPAGE:
www.ebi.ac.uk
CATEGORY:
ROOT \ Science and Engineering \ Bioinformatics
Sunflower is an application that models the simultaneous binding of transcription factors to DNA. It uses a hidden Markov model that resembles a sunflower.

Installation

Sunflower has several prerequisites, but most of them are shared with the Genomedata package. You can use the interactive Genomedata install script to install Genomedata and its prerequisites, and set up your environment properly to use them. Just type these two commands on your UNIX system:

wget http://noble.gs.washington.edu/proj/genomedata/install.py
python install.py


After logging out and logging in again, you can easily install Sunflower with this command:

easy_install http://www.ebi.ac.uk/~hoffman/software/sunflower/

Last updated on June 8th, 2010

requirements

#simultaneous binding #transcription factors #DNA #transcription #factors #bindings

Add your review!

SUBMIT