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  • Home > Linux > Science and Engineering > Bioinformatics

    MacMolPlt 7.1

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    Downloads: 665  View global page NEW!  Tell us about an update
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    14 user(s)
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    Category:
    Brett Bode | More programs
    GPL / FREE
    April 8th, 2008, 12:26 GMT
    ROOT / Science and Engineering / Bioinformatics

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    MacMolPlt description

    MacMolPlt is a modern graphics program for plotting 3-D molecular structures and normal modes (vibrations).

    MacMolPlt is a modern graphics program for plotting 3-D molecular structures and normal modes (vibrations). Modern means:

    · Mouse driven interface for real-time rotation and translation.
    · copy and paste functionality for interfacing to other programs such as word processors or other graphics programs (like ChemDraw).
    · simple printing to color or black and white printers (publication quality).
    · multiple files open at once.

    Product's homepage

    Here are some key features of "MacMolPlt":

    · It reads a variety of file formats including any GAMESS input, log or IRC file directly to create animations of IRC's, DRC's, and optimizations. You may also import a $VEC group from any file (such as a GAMESS .DAT file). In addition xMol XYZ files, MolDen format files and Chemical Markup Language (CML) files are supported. Also some PDB file support and MDL MolFile support is included.
    · Molecular point group symmetry is supported.
    · You may also paste GAMESS and Gaussian-92 style cartesian coordinates directly into the program.
    · Animation of Normal Modes.
    · Animation of IRC's, and DRC's including orbitals.
    · Simple Energy Plots (including geometrical parameters).
    · Simple frequency line graph of frequency versus infrared or Raman intensity.
    · Append multiple GAMESS files together to create a single animation.
    · Build or modify molecules using the graphical molecule builder.
    · Quickly build realistic 3D structures.
    · rotate selected atoms about bonds, change bond or dihedral angles.
    · translate and rotate selected subgroups.
    · Build molecules from scratch using cartesian or internal coordinates
    · 2D orbital, total electron density contour map display
    · 3D molecular orbital, total electron density display
    · density difference maps
    · Molecular Electrostatic Potential Maps
    · Simple GAMESS input (.inp) builder
    · 3D color display with lighting and shading using OpenGL under MacOS X.

      


    TAGS:

    3D plotting | molecular structures | normal modes | 3D | plotting | molecular



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