CaPSID 1.4.3

Computational Pathogen Sequence Identification

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What's new in CaPSID 1.4.3:

  • Fixes Error message when running subtraction and alignment is not found
  • More work on fixing long running queries
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LICENSE TYPE:
GPL v3 
USER RATING:
UNRATED
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DEVELOPED BY:
Shane Wilson
HOMEPAGE:
github.com
CATEGORY:
ROOT \ Science and Engineering \ Bioinformatics
CaPSID is a comprehensive open source platform which integrates a high-performance computational pipeline for pathogen sequence identification and characterization in human genomes and transcriptomes together with a scalable results database and a user-friendly web-based software application for managing, querying and visualizing results.

Getting Started

You will need a MongoDB database, a Python 2.6+ installation and Apache Tomcat 6+. For more details, read the wiki:

http://wiki.github.com/capsid/capsid/home

Last updated on September 5th, 2012

requirements

#pathogen sequence #sequence identification #computational #pathogen #sequence #identification

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