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  • Home > Linux > Programming > Perl Modules

    Bio::Taxonomy::Tree 1.6.901

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    Category:
    Dan Kortschak | More programs
    Perl Artistic License / FREE
    May 22nd, 2012, 14:53 GMT
    ROOT / Programming / Perl Modules

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    Bio::Taxonomy::Tree description

    An Organism Level Implementation of TreeI interface.

    Bio::Taxonomy::Tree -is an Organism Level Implementation of TreeI interface.

    SYNOPSIS

     # NB: This module is deprecated. Use Bio::Taxon in combination with
     # Bio::Tree::Tree instead

     # like from a TreeIO
     my $treeio = Bio::TreeIO->new(-format => 'newick', -file => 'treefile.dnd');
     my $tree = $treeio->next_tree;
     my @nodes = $tree->get_nodes;
     my $root = $tree->get_root_node;
     my @leaves = $tree->get_leaves;


    This object holds handles to Taxonomic Nodes which make up a tree.


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    Requirements:

    · Perl

      


    TAGS:

    TreeI interface | Organism Level Implementation | Perl module | Perl | Organism | Level

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